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You may cite MorphoDig with the following
Lebrun, R. MorphoDig, an open-source 3D freeware dedicated to biology. IPC5, Paris, France; 07/2018
No. However, you can digitize 3D landmarks on complex 3D surfaces using MorphoDig, which you can use in other software.
No. To extract 3D meshes CT/MRI data sets, you have to use another software. However, you can edit 3D Meshes in various ways using MorphoDig.
Yes, definitely. Most actions can be undone and redone.