The present 3D Dataset contains the 3D models analyzed in: Kaigai N et al. Morphogenesis and three-dimensional movement of the stomach during the human embryonic period, Anat Rec (Hoboken). 2014 May;297(5):791-797. doi: 10.1002/ar.22833. 

Homo sapiens KC-CS16STM27159 View specimen

M3#56 computationally reconstructed stomach of the human embryo (M3#56_KC-CS16STM27159) at Carnegie Stage 16 (Crown Rump Length= 9.9mm). Type: "3D_surfaces" doi: 10.18563/m3.sf56   state:published

Download 3D surface file

Homo sapiens KC-CS17STM20383 View specimen

M3#57 computationally reconstructed stomach of the human embryo (M3#57_KC-CS17STM20383) at Carnegie Stage 17 (Crown Rump Length= 12.3mm). Type: "3D_surfaces" doi: 10.18563/m3.sf57   state:published

Download 3D surface file

Homo sapiens KC-CS18STM21807 View specimen

M3#58 computationally reconstructed stomach of the human embryo (M3#58_KC-CS18STM21807) at Carnegie Stage 18 (Crown Rump Length= 14.7mm). Type: "3D_surfaces" doi: 10.18563/m3.sf58   state:published

Download 3D surface file

Homo sapiens KC-CS19STM17998 View specimen

M3#59 computationally reconstructed stomach of the human embryo (M3#59_KC-CS19STM17998) at Carnegie Stage 19 (Crown Rump Length was unmeasured ). Type: "3D_surfaces" doi: 10.18563/m3.sf59   state:published

Download 3D surface file

Homo sapiens KC-CS20STM20785 View specimen

M3#60 computationally reconstructed stomach of the human embryo (M3#60_KC-CS20STM20785) at Carnegie Stage 20 (Crown Rump Length= 18.7 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf60   state:published

Download 3D surface file

Homo sapiens KC-CS21STM24728 View specimen

M3#61 computationally reconstructed stomach of the human embryo (M3#61_KC-CS21STM24728) at Carnegie Stage 21 (Crown Rump Length= 20.9 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf61   state:published

Download 3D surface file

Homo sapiens KC-CS22STM26438 View specimen

M3#62 computationally reconstructed stomach of the human embryo (M3#62_KC-CS22STM26438) at Carnegie Stage 22 (Crown Rump Length= 21.5 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf62   state:published

Download 3D surface file

Homo sapiens KC-CS23STM20018 View specimen

M3#63 computationally reconstructed stomach of the human embryo (M3#63_KC-CS23STM20018) at Carnegie Stage 23 (Crown Rump Length= 23.1 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf63   state:published

Download 3D surface file

This contribution contains the 3D models described and figured in the following publication: Mourlam, M., Orliac, M. J. (2017), Protocetid (Cetacea, Artiodactyla) bullae and petrosals from the Middle Eocene locality of Kpogamé, Togo: new insights into the early history of cetacean hearing. Journal of Systematic Palaeontology https://doi.org/10.1080/14772019.2017.1328378
  

?Carolinacetus indet. UM KPG-M 164 View specimen

M3#132 left petrosal of ?Carolinacetus sp. from the locality of Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.132   state:published

Download 3D surface file

indet. indet. UM KPG-M 73 View specimen

	M3#133 labelled surface of the left petrosal Type: "3D_surfaces" doi: 10.18563/m3.sf.133   state:published	Download 3D surface file
	M3#134 left bullaof Protocetidae indeterminate from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.134   state:published	Download 3D surface file
	M3#135 petrotympanic complex of Protocetidae indeterminate from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.135   state:published	Download 3D surface file

?Carolinacetus indet. UM KPG-M 33 View specimen

M3#136 left auditory bulla of a juvenile specimen of ?Carolinacetus sp. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.136   state:published

Download 3D surface file

Togocetus traversei UM KPG-M 80 View specimen

M3#137 fragmentary right auditory bulla of Togocetus traversei from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.137   state:published

Download 3D surface file

The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

Malacochersus tornieri ZM 100.102 View specimen

	M3#129 Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves. Type: "3D_surfaces" doi: 10.18563/m3.sf.129   state:published	Download 3D surface file
	M3#130 3D dataset of skull of Malacochersus tornieri (ZM 100.102) Type: "3D_CT" doi: 10.18563/m3.sf.130   state:published	Download CT data

This contribution contains the 3D models of the bony labyrinths of two protocetid archaeocetes from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2017). https://doi.org/10.1016/j.cub.2017.04.061  

?Carolinacetus indet. UM KPG-M 164 View specimen

M3#149 bony labyrinth of ? Carolinacetus sp. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.149   state:published

Download 3D surface file

indet. indet. UM KPG-M 73 View specimen

M3#150 bony labyrinth of Protocetidae indet. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.150   state:published

Download 3D surface file

Considerable morphological variations are found in the middle ear among mammals. Here I present a three-dimensional atlas of the middle ear ossicles of eulipotyphlan mammals. This group has radiated into various environments as terrestrial, aquatic, and subterranean habitats independently in multiple lineages. Therefore, eulipotyphlans are an ideal group to explore the form-function relationship of the middle ear ossicles. This comparative atlas of hedgehogs, true shrews, water shrews, mole shrews, true moles, and shrew moles encourages future studies of the middle ear morphology of this diverse group.
  

Erinaceus europaeus DK2331 View specimen

M3#151 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.151   state:published

Download 3D surface file

Anourosorex yamashinai SIK_yamashinai View specimen

M3#152 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.152   state:published

Download 3D surface file

Blarina brevicauda M8003 View specimen

M3#153 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.153   state:published

Download 3D surface file

Chimarrogale platycephala DK5481 View specimen

M3#162 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.162   state:published

Download 3D surface file

Suncus murinus DK1227 View specimen

M3#155 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.155   state:published

Download 3D surface file

Condylura cristata SIK0050 View specimen

M3#156 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.156   state:published

Download 3D surface file

Euroscaptor klossi SIK0673 View specimen

M3#163 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.163   state:published

Download 3D surface file

Euroscaptor malayana SIK_malayana View specimen

M3#164 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.164   state:published

Download 3D surface file

Mogera wogura DK2551 View specimen

M3#159 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.159   state:published

Download 3D surface file

Talpa altaica SIK_altaica View specimen

M3#161 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.161   state:published

Download 3D surface file

Urotrichus talpoides DK0887 View specimen

M3#165 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.165   state:published

Download 3D surface file

Oreoscaptor mizura DK6545 View specimen

M3#166 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.166   state:published

Download 3D surface file

Scalopus aquaticus SIK_aquaticus View specimen

M3#167 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.167   state:published

Download 3D surface file

Scapanus orarius SIK_orarius View specimen

M3#168 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.168   state:published

Download 3D surface file

Neurotrichus gibbsii SIK_gibbsii View specimen

M3#169 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.169   state:published

Download 3D surface file

This contribution contains the 3D model of the holotype of Simplomys hugi, the new dormouse species from the locality of Glovelier described and figured in the following publication: New data on the Miocene dormouse Simplomys García-Paredes, 2009 from the peri-alpin basins of Switzerland and Germany: palaeodiversity of a rare genus in Central Europe. https://doi.org/10.1007/s12549-018-0339-y 

Simplomys hugi MJSN-GLM017-0001 View specimen

M3#385 the left maxilla with four teeth ( DP4, P4, M1 and M2) Type: "3D_surfaces" doi: 10.18563/m3.sf.385   state:published

Download 3D surface file

This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal, A. and Nieto, M. N. In press. Brief comment on the brain and inner ear of Giganotosaurus carolinii (Dinosauria: Theropoda) based on CT scans. Ameghiniana. https://doi.org/10.5710/AMGH.25.10.2019.3237
  

Giganotosaurus carolinii MUCPv-CH-1 View specimen

M3#504 The current file contents 3D models of the braincase, brain, left and right inner ears Type: "3D_surfaces" doi: 10.18563/m3.sf.504   state:published

Download 3D surface file

This contribution includes the 3D models of the reconstructed ossicular chain of the cainotheriid Caenomeryx filholi from the late Oligocene locality of Pech Desse (MP28, Quercy, France) described and figured in the publication of Assemat et al. (2020). It represents the oldest ossicular chain reconstruction for a Paleogene terrestrial artiodactyl species. 

Caenomeryx filholi UM PDS 3353 View specimen

M3#508 reconstruction of the middle ear with petrosal, bulla, stapes, incus, malleus Type: "3D_surfaces" doi: 10.18563/m3.sf.508   state:published

Download 3D surface file

The present Dataset contains the 3D model of the male genital organs of greater horseshoe bat, Rhinolophus ferrumequinum. This is the first detailed 3D structure of the soft-tissue genital organs of bats. The 3D model was generated using microCT and techniques of virtual reconstruction. 

Rhinolophus ferrumequinum JP18-006 View specimen

M3#521 The genital organs of male greater horseshoe bat. Type: "3D_surfaces" doi: 10.18563/m3.sf.521   state:published

Download 3D surface file

The present 3D Dataset contains two 3D models described in Tissier et al. (https://doi.org/10.1098/rsos.200633): the only known complete mandible of the early-branching rhinocerotoid Epiaceratherium magnum Uhlig, 1999, and a hypothetical reconstruction of the complete archetypic skull of Epiaceratherium Heissig, 1969, created by merging three cranial parts from three distinct Epiaceratherium species. 

Epiaceratherium magnum NMB.O.B.928 View specimen

M3#534 3D surface model of the mandible NMB.O.B.928 of Epiaceratherium magnum, with texture file. Type: "3D_surfaces" doi: 10.18563/m3.sf.534   state:published

Download 3D surface file

Epiaceratherium magnum NMB.O.B.928 + MJSN POI007–245 + NMB.I.O.43 View specimen

M3#535 Archetypal reconstruction of the skull of Epiaceratherium, generated by 3D virtual association of the cranium of E. delemontense (MJSN POI007–245, in blue), mandible of E. magnum (NMB.O.B.928, green) and snout of E. bolcense (NMB.I.O.43, in orange). Type: "3D_surfaces" doi: 10.18563/m3.sf.535   state:published

Download 3D surface file

The present 3D Dataset contains the 3D models of the endocranial cast of two specimens of Indohyus indirae described in the article entitled “The endocranial cast of Indohyus (Artiodactyla, Raoellidae): the origin of the cetacean brain” (Orliac and Thewissen, 2021). They represent the cast of the main cavity of the braincase as well as associated intraosseous sinuses.
  

Indohyus indirae RR 207 View specimen

M3#710 cast of the main endocranial cavity and associated intraosseous sinuses Type: "3D_surfaces" doi: 10.18563/m3.sf.710   state:published

Download 3D surface file

Indohyus indirae RR 601 View specimen

M3#711 casts of the main endocranial cavity Type: "3D_surfaces" doi: 10.18563/m3.sf.711   state:published

Download 3D surface file

The present 3D Dataset contains the 3D model of a skull analyzed in “A Puma concolor (Carnivora: Felidae) in the Middle-Late Holocene landscapes of the Brazilian Northeast (Bahia): submerged cave deposits and stable isotopes”. The 3D model was generated by photogrammetry. 

Puma concolor MN 57461 View specimen

M3#843 Cranium Type: "3D_surfaces" doi: 10.18563/m3.sf.843   state:published

Download 3D surface file

This contribution contains the 3D models of a set of Famennian conodont elements belonging to the species Icriodus alternatus analyzed in the following publication: Girard et al. 2022: Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus. 

Icriodus alternatus UM BUS 031 View specimen

M3#887 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.887   state:published

Download 3D surface file

Icriodus alternatus UM BUS 032 View specimen

M3#888 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.888   state:published

Download 3D surface file

Icriodus alternatus UM BUS 033 View specimen

M3#889 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.889   state:published

Download 3D surface file

Icriodus alternatus UM BUS 034 View specimen

M3#890 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.890   state:published

Download 3D surface file

Icriodus alternatus UM BUS 035 View specimen

M3#891 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.891   state:published

Download 3D surface file

Icriodus alternatus UM BUS 036 View specimen

M3#892 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.892   state:published

Download 3D surface file

Icriodus alternatus UM BUS 037 View specimen

M3#893 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.893   state:published

Download 3D surface file

Icriodus alternatus UM BUS 038 View specimen

M3#894 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.894   state:published

Download 3D surface file

Icriodus alternatus UM BUS 039 View specimen

M3#895 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.895   state:published

Download 3D surface file

Icriodus alternatus UM BUS 040 View specimen

M3#896 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.896   state:published

Download 3D surface file

Icriodus alternatus UM BUS 041 View specimen

M3#897 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.897   state:published

Download 3D surface file

Icriodus alternatus UM BUS 042 View specimen

M3#898 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.898   state:published

Download 3D surface file

Icriodus alternatus UM BUS 043 View specimen

M3#899 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.899   state:published

Download 3D surface file

Icriodus alternatus UM BUS 044 View specimen

M3#900 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.900   state:published

Download 3D surface file

Icriodus alternatus UM BUS 045 View specimen

M3#901 conodont element Type: "3D_surfaces" doi: 10.18563/m3.sf.901   state:published

Download 3D surface file

The present 3D Dataset contains the 3D model analyzed in Gaetano, L. C., Abdala, F., Seoane, F. D., Tartaglione, A., Schulz, M., Otero, A., Leardi, J. M., Apaldetti, C., Krapovickas, V., and Steinbach, E. 2021. A new cynodont from the Upper Triassic Los Colorados Formation (Argentina, South America) reveals a novel paleobiogeographic context for mammalian ancestors. Scientific Reports. 

Tessellatia bonapartei PULR-V121 View specimen

M3#960 3D surface model of PULR-V121 Type: "3D_surfaces" doi: 10.18563/m3.sf.960   state:published

Download 3D surface file

Turtles are one of the most impressive vertebrates. Much of the body is either hidden in a shell or can be drawn into it. Turtles impress with their individual longevity and their often peaceful disposition. Also, with their resilience, they have survived all extinction events since their emergence in the Late Triassic. Today's diversity of shapes is impressive and ranges from the large and high domed Galapagos turtles to the hamster-sized flat pancake turtles. The holotype of one of the oldest fossil turtles, Proganochelys quenstedtii, is housed in the paleontological collection in Tübingen/Germany. Since its discovery some years before 1873, P. quenstedtii has represented the 'prototype' of the turtle and has had an eventful scientific history. It was found in Neuenhaus (Häfner-Neuhausen in Schönbuch forest), Baden-Württemberg, Germany, and stems from Löwenstein-Formation (Weißer Keupersandstein), Late Triassic. The current catalogue number is GPIT-PV-30000. The specimen is listed in the historical inventory “Tübinger Petrefaktenverzeichnis 1841 bis 1896, [folio 326v.]“, as “[catalogue number: PV]16549, Schildkröte Weiser Keupersandstein Hafnerhausen” [turtle from White Keuper Sandstone]. Another, more recent synonym is “GPIT/RE/9396”. The same specimen was presented as uncatalogued by Gaffney (1990). Here we provide a surface scan of the steinkern for easier access of this famous specimen to the scientific community.
  

Proganochelys quenstedtii GPIT-PV-30000 View specimen

M3#967 This the surface model of the steinkern of the shell of Proganochelys quenstedtii. Type: "3D_surfaces" doi: 10.18563/m3.sf.967   state:published

Download 3D surface file

The present 3D dataset contains the 3D models of the holotype of Proterochampsa nodosa that were built and analysed in “Redescription, taxonomic revaluation, and phylogenetic affinities of Proterochampsa nodosa (Archosauriformes: Proterochampsidae), early Late Triassic of Candelaria Sequence (Santa Maria Supersequence)”. 

Proterochampsa nodosa MCP 1694-PV View specimen

M3#974 3D models of Proterochampsa nodosa. Model 1: skull. Model 2: mandible. Model 3: left mandibular ramus. Type: "3D_surfaces" doi: 10.18563/m3.sf.974   state:published

Download 3D surface file

The present 3D Dataset contains the 3D models analyzed in Keppeler, H., Schultz, J. A., Ruf, I., & Martin, T., 2023. Cranial anatomy of Hypisodus minimus (Artiodactyla: Ruminantia) from the Oligocene Brule Formation of North America. Palaeontographica Abteilung A. 

Hypisodus minimus SMNK-PAL 27212 View specimen

	M3#1031 CT image stack of a skull of Hypisodus minimus. Also includes a lumbar vertebra and a probable proximal phalanx of digit III or IV. Type: "3D_CT" doi: 10.18563/m3.sf.1031   state:published	Download CT data
	M3#1036 3D surface models of a skull of Hypisodus minimus (SMNK-PAL27212). The data includes a surface model for: basisphenoid, tympanic bullae, ethmoid (lamina perpendicularis), frontals, jugal (left), jugal (right), lacrimals, lower dentition, mandibles, mastoid processes, maxillaries, maxilloturbinals, nasals, occipital, palatine, parietals, petrosals, presphenoid, squamosals, turbinates, upper dentition, and the vomer. Type: "3D_surfaces" doi: 10.18563/m3.sf.1036   state:published	Download 3D surface file

Hypisodus minimus SMNK-PAL 27213 View specimen

	M3#1033 CT image stack of a skull of Hypisodus minimus. Also shows numerous postcranial material including an atlas articulated with the occipital bone, the distal part of a left humerus articulated to radius and ulna, a part of a femur, a part of a tibia and fibula, unidentifiable tarsal bones, parts of the metatarsals II, III, IV and V and their phalanges, a proximal phalanx of digit III or IV, a middle phalanx of digit III or IV, a possible patella and calcaneus, as well as numerous unidentifiable broken bony fragments. Type: "3D_CT" doi: 10.18563/m3.sf.1033   state:published	Download CT data
	M3#1035 3D surface models of a skull of Hypisodus minimus (SMNK-PAL27213). The data includes a surface model for: atlas, basisphenoid, tympanic bullae, nasals, occipital, the petrosals, and the inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.1035   state:published	Download 3D surface file

The present 3D Dataset contains 3D models of the cranial, visceral, and pectoral endoskeleton of Iniopera, an iniopterygian stem-group holocephalan from the Pennsylvanian of the USA. These data formed the basis for the analyses carried out in Dearden et al. (2023) “Evidence for high-performance suction feeding in the Pennsylvanian stem-group holocephalan Iniopera” PNAS. 

Iniopera sp. KUNHM 22060, 158289 View specimen

M3#1034 plys of the head endoskeleton of Iniopera sp. Type: "3D_surfaces" doi: 10.18563/m3.sf.1034   state:published

Download 3D surface file

The present 3D Dataset contains the 3D models of an ilium, a vertebra, and a partial scapula of Prestosuchus sp. that were analyzed in “New Loricata remains from the Pinheiros-Chiniquá Sequence (Middle-Upper Triassic), southern Brazil”. 

Prestosuchus sp. UFSM11603 View specimen

M3#1080 Surface scan of a right ilium of Prestosuchus sp. with a 0.4 mm resolution. Type: "3D_surfaces" doi: 10.18563/m3.sf.1080   state:published

Download 3D surface file

Prestosuchus sp. UFSM11233 View specimen

M3#1081 Surface scan of a partial right scapula of Prestosuchus sp. with a 0.4mm resolution. Type: "3D_surfaces" doi: 10.18563/m3.sf.1081   state:published

Download 3D surface file

Prestosuchus sp. UFSM11602a View specimen

M3#1082 Surface scan of a anterior dorsal vertebra of Prestosuchus sp. with a 0.2 mm resolution. Type: "3D_surfaces" doi: 10.18563/m3.sf.1082   state:published

Download 3D surface file

The present 3D Dataset contains the 3D model of the endocranial cast of Palaeolama sp. from the mid-Pleistocene (~1.2 Mya) of South America, analyzed in Balcarcel et al. 2023.
  

Palaeolama sp. PIMUZ A/V 4091 View specimen

M3#1128 3D model of a natural endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.1128   state:published

Download 3D surface file