This contribution contains 3D models of extinct rodents Dinomyidae from Miocene and Quaternary of Brazil. The Miocene specimens that were digitalized include the holotypes of Potamarchus adamiae, Pseudopotamarchus villanuevai, and Ferigolomys pacarana collected in the Solimões Formation (Upper Miocene), northern Brazil. The Quaternary specimens are the holotype and paratype of Niedemys piauiensis, found in Upper Pleistocene deposits from northeast Brazil. 

Potamarchus adamiae UFAC-CS 011 View specimen

M3#410 UFAC-CS 011 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.410   state:published

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Potamarchus adamiae UFAC-CS 043 View specimen

M3#411 UFAC-CS 043, left dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.411   state:published

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Pseudopotamarchus villanuevai UFAC 4762 View specimen

M3#412 UFAC 4762 – holotype, incomplete right maxilla with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.412   state:published

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Ferigolomys pacarana UFAC 6460 View specimen

M3#413 UFAC 6460 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.413   state:published

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Drytomomys sp. UFAC 2742 View specimen

M3#414 UFAC 2742, right dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.414   state:published

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Niedemys piauiensis FUMDHAM 113-146365-2 View specimen

M3#418 FUMDHAM 113-146365-2 - holotype, upper right tooth Type: "3D_surfaces" doi: 10.18563/m3.sf.418   state:published

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Niedemys piauiensis FUMDHAM 113-145304-2 View specimen

M3#419 FUMDHAM 113-145304-2 - paratype, left lower molar Type: "3D_surfaces" doi: 10.18563/m3.sf.419   state:published

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The present 3D Dataset contains the 3D models of Carboniferous-Permian chondrichthyan neurocrania analyzed in “Phylogenetic implications of the systematic reassessment of Xenacanthiformes and ‘Ctenacanthiformes’ (Chondrichthyes) neurocrania from the Carboniferous-Permian Autun Basin (France)”. 

cf. Triodus sp MNHN.F.AUT811 View specimen

M3#834 MHNH.F.AUT811 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.834   state:published

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indet indet MNHN.F.AUT812 View specimen

M3#835 MHNH.F.AUT812 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.835   state:published

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indet indet MNHN.F.AUT813 View specimen

M3#836 MHNH.F.AUT813 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.836   state:published

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cf. Triodus sp MNHN.F.AUT814 View specimen

M3#837 MHNH.F.AUT814 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.837   state:published

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cf. Triodus sp MHNE.2021.9.1 View specimen

M3#838 MHNE.2021.9.1 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.838   state:published

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The present 3D Dataset contains the 3D models analyzed in the publication “Systematic and locomotor diversification of the Adapis group (Primates, Adapiformes) in the late Eocene of the Quercy (Southwest France), revealed by humeral remains”. In this paper, twenty humeral specimens from the old and new Quercy collections attributed to the fossil primates Adapis and Palaeolemur are described and analysed together. In this dataset only the scans of the fossils belonging to the collections of Université de Montpellier are provided.
In our paper (Marigó et al., 2019) we provide a qualitative and quantitative analysis of the different humeri, revealing that high variability is present within the “Adapis group” sample. Six different morphotypes are identified, confirming that what has often been called “Adapis parisiensis” is a mix of different species that present different locomotor adaptations. 

Adapis sp. UM ROS 2-95 View specimen

M3#356 Complete right humerus ROS 2-95 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.356   state:published

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Adapis sp. UM ROS 2-536 View specimen

M3#357 Proximal end of the right humerus ROS 2-536 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.357   state:published

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Adapis sp. UM ROS 2-534 View specimen

M3#358 Distal end of the left humerus ROS 2-534 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.358   state:published

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Adapis sp. UM ROS 2-535 View specimen

M3#359 Distal end of the left humerus ROS 2-535 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.359   state:published

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Adapis sp. UM ROS 2-80 View specimen

M3#360 Proximal end of the right humerus ROS 2-80 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.360   state:published

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Adapis sp. UM ROS 2-79 View specimen

M3#361 Distal end of the right humerus ROS 2-79 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.361   state:published

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Adapis sp. UM ECA 1364 View specimen

M3#362 Distal end of the left humerus ECA 1364 attributed to the Adapis group Type: "3D_surfaces" doi: 10.18563/m3.sf.362   state:published

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Adapis sp. UM ACQ-262 View specimen

M3#373 3D model of ACQ 262. Humerus Type: "3D_surfaces" doi: 10.18563/m3.sf373   state:published

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The present 3D Dataset contains the 3D models analyzed in ”Morphological features of tooth development and replacement in the rabbit Oryctolagus cuniculus”, Archives of Oral Biology, https://doi.org/10.1016/j.archoralbio.2019.104576 

Oryctogalus cuniculus E14 View specimen

M3#390 Right cheek teeth, Left and right incisors at 14 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.390   state:published

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Oryctogalus cuniculus E16 View specimen

M3#391 Left cheek teeth, Left and right incisors at 16 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.391   state:published

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Oryctogalus cuniculus E18 View specimen

M3#392 Left cheek teeth and incisors at 18 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.392   state:published

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Oryctogalus cuniculus E20 View specimen

M3#393 Left cheek teeth and incisors at 20 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.393   state:published

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Oryctogalus cuniculus E22 View specimen

M3#394 Left lower cheek teeth and incisors, right upper cheek teeth and incisors at 22 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.394   state:published

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Oryctogalus cuniculus E24 View specimen

M3#395 Left cheek teeth and incisors at 24 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.395   state:published

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Oryctogalus cuniculus E28 View specimen

M3#396 Right cheek teeth and incisors at 28 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.396   state:published

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Oryctogalus cuniculus E26 View specimen

M3#397 Right cheek teeth and incisors at 26 dpf Type: "3D_surfaces" doi: 10.18563/m3.sf.397   state:published

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The present 3D Dataset contains the 3D models analyzed in the following publication: Paulina-Carabajal, A., Ezcurra, M., Novas, F., 2019. New information on the braincase and endocranial morphology of the Late Triassic neotheropod Zupaysaurus rougieri using Computed Tomography data. Journal of Vertebrate Paleontology. https://doi.org/10.1080/02724634.2019.1630421
  

Zupaysaurus rougieri PULR 076 View specimen

M3#424 The Zip contains 3 files, which correspond to: PULR_076-M1: Zupaysaurus rougieri skull, braincase and cranial endocast PULR_076-M2: Zupaysaurus rougieri braincase PULR_076-M1: Zupaysaurus rougieri brain and inner ear Type: "3D_surfaces" doi: 10.18563/m3.sf.424   state:published

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The present 3D Dataset contains the 3D model of a left dentary with m1-m3 analyzed in “A new fossil of Tayassuidae (Mammalia: Certartiodactyla) from the Pleistocene of northern Brazil”. The 3D model was generated using a laser scanning. 

cf. Pecari tajacu UFSM 11606 View specimen

M3#498 Left dentary with m1-m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.498   state:published

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The present 3D Dataset contains the 3D models analyzed in the article entitled "One skull to rule them all? Descriptive and comparative anatomy of the masticatory apparatus in five mice species based on traditional and digital dissections" (Ginot et al. 2018, Journal of Morphology, https://doi.org/10.1002/jmor.20845). 

Mus cervicolor R7314 View specimen

M3#343 .ply surfaces of the skull and masticatory muscles of Mus cervicolor. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.343   state:published

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Mus caroli R7264 View specimen

M3#344 .ply surfaces of the skull and masticatory muscles of Mus caroli. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.344   state:published

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Mus fragilicauda R7260 View specimen

M3#345 .ply surfaces of the skull and masticatory muscles of Mus fragilicauda. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.345   state:published

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Mus pahari R7226 View specimen

M3#346 .ply surfaces of the skull and masticatory muscles of Mus pahari. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.346   state:published

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Mus minutoides minutoides-1 View specimen

M3#347 .ply surfaces of the skull and masticatory muscles of Mus minutoides. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.347   state:published

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This contribution contains 3D models of the cranial skeleton and muscles in an elephantfish (Callorhinchus milii) and a catshark (Scyliorhinus canicula), based on synchrotron tomographic scans. These datasets were analyzed and described in Dearden et al. (2021) “The morphology and evolution of chondrichthyan cranial muscles: a digital dissection of the elephantfish Callorhinchus milii and the catshark Scyliorhinus canicula.” Journal of Anatomy. 

Callorhinchus milii 001 View specimen

M3#708 3D models of the cranial skeleton and muscles of Callorhinchus milii, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.708   state:published

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Scyliorhinus canicula 002 View specimen

M3#709 3D models of the cranial skeleton and muscles of Scyliorhinus canicula, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.709   state:published

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The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

Malacochersus tornieri ZM 100.102 View specimen

	M3#129 Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves. Type: "3D_surfaces" doi: 10.18563/m3.sf.129   state:published	Download 3D surface file
	M3#130 3D dataset of skull of Malacochersus tornieri (ZM 100.102) Type: "3D_CT" doi: 10.18563/m3.sf.130   state:published	Download CT data

This contribution contains the 3D models described and figured in the following publication: Molnar, JL, Pierce, SE, Bhullar, B-A, Turner, AH, Hutchinson, JR (accepted). Morphological and functional changes in the crocodylomorph vertebral column with increasing aquatic adaptation. Royal Society Open Science. 

Protosuchus richardsoni AMNH-VP 3024 View specimen

M3#44 8th and 9th dorsal vertebrae, 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae. Type: "3D_surfaces" doi: 10.18563/m3.sf44   state:published

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Terrestrisuchus gracilis NHM-PV R 7562 View specimen

M3#45 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae Type: "3D_surfaces" doi: 10.18563/m3.sf45   state:published

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Pelagosaurus typus NHM-PV OR 32598 View specimen

M3#46 7th and 8th dorsal vertebrae, 11th and 12th dorsal vertebrae, 15th dorsal vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf46   state:published

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Metriorhynchus superciliosus NHM-PV R 2054 View specimen

M3#47 6th and 7th dorsal vertebrae, 10th and 11th dorsal vertebrae, 17th dorsal vertebra and sacral vertebra Type: "3D_surfaces" doi: 10.18563/m3.sf47   state:published

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Crocodylus niloticus FNC0 View specimen

M3#48 7th and 8th dorsal vertebrae, 1st and 2nd lumbar vertebrae, 5th lumbar vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf48   state:published

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This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal A and Calvo JO 2021. Re-description of the braincase of the rebbachisaurid sauropod Limaysaurus tessonei and novel endocranial information based on CT scans. Anais da Academia Brasileira de Ciências 93(Suppl. 2): e20200762 https://doi.org/10.1590/0001-3765202120200762 

Limaysaurus tessonei MUCPv-205 View specimen

M3#700 Renderings of the virtually isolate braincase, brain, and right inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.700   state:published

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The present 3D Dataset contains the 3D models analyzed in Benites-Palomino A., Velez-Juarbe J., Altamirano-Sierra A., Collareta A., Carrillo-Briceño J., and Urbina M. 2022. Sperm whales (Physeteroidea) from the Pisco Formation, Peru, and their Trophic role as fat-sources for Late Miocene sharks.
  

Scaphokogia cochlearis MUSM 978 View specimen

M3#977 juvenile Scaphokogia cochlearis Type: "3D_surfaces" doi: 10.18563/m3.sf.977   state:published

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This contribution contains the 3D models described and figured in the following publication: Mennecart B., de Perthuis Ad., Rössner G.E., Guzmán J.A., de Perthuis Au., Costeur L. The first French tragulid skull (Mammalia, Ruminantia, Tragulidae) and associated tragulid remains from the Middle Miocene of Contres (Loir-et-Cher, France). Comptes Rendus Palévol. https://doi.org/10.1016/j.crpv.2017.08.004 

Dorcatherium crassum NMB Fa.213.abg View specimen

M3#181 The 3D surface files of the specimen NMB Fa.213 are the reconstructions of the main skull fragments, the right petrosal bone, and the left bony labyrinth. Type: "3D_surfaces" doi: 10.18563/m3.sf.181   state:published

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The present 3D Dataset contains the 3D model analyzed in the following publication: Solé et al. (2018), Niche partitioning of the European carnivorous mammals during the paleogene. Palaios. https://doi.org/10.2110/palo.2018.022 

Hyaenodon leptorhynchus FSL848325 View specimen

M3#336 The specimen FSL848325 is separated in two fragments: the anterior part bears the incisors, the deciduous and permanent canines, while the posterior part bears the right P3, P4, M1 and M2. The P2 is isolated. When combined, the cranium length is approximatively 10.5 cm long. The anterior part is 6.9 cm long and 2.15 cm wide (taken at the level of the P1). The posterior part is 4.8 cm long. The anterior part of the cranium is very narrow. Type: "3D_surfaces" doi: 10.18563/m3.sf.336   state:published

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The present contribution contains the 3D model and dataset analyzed in the following publication: Scheyer, T. M., J. M. Neenan, T. Bodogan, H. Furrer, C. Obrist, and M. Plamondon. 2017. A new, exceptionally preserved juvenile specimen of Eusaurosphargis dalsassoi (Diapsida) and implications for Mesozoic marine diapsid phylogeny. Scientific Reports, https://doi.org/10.1038/s41598-017-04514-x . 

Eusaurosphargis dalsassoi PIMUZ A/III 4380 View specimen

	M3#179 94 extracted surfaces of skeletal elements of PIMUZ A/III 4380 Type: "3D_surfaces" doi: 10.18563/m3.sf.179   state:published	Download 3D surface file
	M3#180 Accompanying CT scan dataset Type: "3D_CT" doi: 10.18563/m3.sf.180   state:published	Download CT data

The present 3D Dataset contains two 3D models described in Tissier et al. (https://doi.org/10.1098/rsos.200633): the only known complete mandible of the early-branching rhinocerotoid Epiaceratherium magnum Uhlig, 1999, and a hypothetical reconstruction of the complete archetypic skull of Epiaceratherium Heissig, 1969, created by merging three cranial parts from three distinct Epiaceratherium species. 

Epiaceratherium magnum NMB.O.B.928 View specimen

M3#534 3D surface model of the mandible NMB.O.B.928 of Epiaceratherium magnum, with texture file. Type: "3D_surfaces" doi: 10.18563/m3.sf.534   state:published

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Epiaceratherium magnum NMB.O.B.928 + MJSN POI007–245 + NMB.I.O.43 View specimen

M3#535 Archetypal reconstruction of the skull of Epiaceratherium, generated by 3D virtual association of the cranium of E. delemontense (MJSN POI007–245, in blue), mandible of E. magnum (NMB.O.B.928, green) and snout of E. bolcense (NMB.I.O.43, in orange). Type: "3D_surfaces" doi: 10.18563/m3.sf.535   state:published

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The present 3D Dataset contains the 3D model of the brain endocast of Neoepiblema acreensis analyzed in “Small within the largest: Brain size and anatomy of the extinct Neoepiblema acreensis, a giant rodent from the Neotropics”. The 3D model was generated using CT-Scanning and techniques of virtual reconstruction.
  

Neoepiblema acreensis UFAC 4515 View specimen

M3#502 Brain endocast of Neoepiblema acreensis Type: "3D_surfaces" doi: 10.18563/m3.sf.502   state:published

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This contribution contains the 3D model(s) described and figured in the following publication: Carolina A. Hoffmann, P. G. Rodrigues, M. B. Soares & M. B. Andrade. 2021. Brain endocast of two non-mammaliaform cynodonts from southern Brazil: an ontogenetic and evolutionary approach, Historical Biology, 33:8, 1196-1207, https://doi.org/10.1080/08912963.2019.1685512 

Probelesodon kitchingi MCP 1600 PV View specimen

M3#978 3D model of the brain endocast of Probelesodon kitchingi. Type: "3D_surfaces" doi: 10.18563/m3.sf.978   state:published

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Massetognathus ochagaviae MCP 3871 PV View specimen

M3#979 3D model of the brain endocast of Massetognathus ochagaviae. Type: "3D_surfaces" doi: 10.18563/m3.sf.979   state:published

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The present 3D Dataset contains the 3D models analyzed in: "a giant dapediid from the Late Triassic of Switzerland and insights into neopterygian phylogeny", Royal Society Open Science, https://doi.org/10.1098/rsos.180497 

Scopulipiscis saxciput PIMUZ A/I 3026 View specimen

	M3#177 3D surfaces of the skull and endocranial spaces inside neurocranium, including the aortic canal, braincase, fossa bridgei, lateral cranial canal, nerves and other passageways, notochord, posterior myodome, and right semicircular canals. Type: "3D_surfaces" doi: 10.18563/m3.sf.177   state:published	Download 3D surface file
	M3#178 Scan of the neurocranium of PIMUZ A/I 3026 Type: "3D_CT" doi: 10.18563/m3.sf.178   state:published	Download CT data

This contribution contains the 3D model of the holotype of Simplomys hugi, the new dormouse species from the locality of Glovelier described and figured in the following publication: New data on the Miocene dormouse Simplomys García-Paredes, 2009 from the peri-alpin basins of Switzerland and Germany: palaeodiversity of a rare genus in Central Europe. https://doi.org/10.1007/s12549-018-0339-y 

Simplomys hugi MJSN-GLM017-0001 View specimen

M3#385 the left maxilla with four teeth ( DP4, P4, M1 and M2) Type: "3D_surfaces" doi: 10.18563/m3.sf.385   state:published

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