The present 3D Dataset contains the 3D models analyzed in: "a giant dapediid from the Late Triassic of Switzerland and insights into neopterygian phylogeny", Royal Society Open Science, https://doi.org/10.1098/rsos.180497 

Scopulipiscis saxciput PIMUZ A/I 3026 View specimen

	M3#177 3D surfaces of the skull and endocranial spaces inside neurocranium, including the aortic canal, braincase, fossa bridgei, lateral cranial canal, nerves and other passageways, notochord, posterior myodome, and right semicircular canals. Type: "3D_surfaces" doi: 10.18563/m3.sf.177   state:published	Download 3D surface file
	M3#178 Scan of the neurocranium of PIMUZ A/I 3026 Type: "3D_CT" doi: 10.18563/m3.sf.178   state:published	Download CT data

The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

Malacochersus tornieri ZM 100.102 View specimen

	M3#129 Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves. Type: "3D_surfaces" doi: 10.18563/m3.sf.129   state:published	Download 3D surface file
	M3#130 3D dataset of skull of Malacochersus tornieri (ZM 100.102) Type: "3D_CT" doi: 10.18563/m3.sf.130   state:published	Download CT data

This contribution contains the 3D models described and figured in the following publication:  Hautier L., Gomes Rodrigues H., Billet G., Asher R.J., 2016. The hidden teeth of sloths: evolutionary vestiges and the development of a simplified dentition. Scientific Reports. doi: 10.1038/srep27763 

Bradypus variegatus ZMB 33812 View specimen

M3#110 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.110   state:published

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Bradypus variegatus ZMB 41122 View specimen

M3#109 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.109   state:published

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Bradypus variegatus MNHN-ZM-MO-1995-326A View specimen

M3#111 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.111   state:published

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Bradypus variegatus MNHN-ZM-MO-1995-326B View specimen

M3#112 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.112   state:published

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Bradypus sp. MNHN-ZM-MO-1902-325 View specimen

M3#113 Three-dimensional reconstruction of the teeth, mandibles, maxillary, and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.113   state:published

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Bradypus sp. MNHN-ZM-MO-1995-327 View specimen

M3#114 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.114   state:published

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Choloepus didactylus MNHN-ZM-MO-1882-625 View specimen

M3#115 Three-dimensional reconstruction of the teeth, mandibles, maxillary and premaxillary bones Type: "3D_surfaces" doi: 10.18563/m3.sf.115   state:published

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This contribution contains the 3D models described and figured in the following publication: Bonis et al. 2023. A new large pantherine and a sabre-toothed cat (Mammalia, Carnivora, Felidae) from the late Miocene hominoid-bearing Khorat sand pits, Nakhon Ratchasima Province, northeastern Thailand. The Science of Nature 110(5):42. https://doi.org/10.1007/s00114-023-01867-4
  

Pachypanthera piriyai CUF-KR-1 View specimen

M3#1209 Holotype of Pachypanthera piriyai, a left hemi-mandible with alveoli for i1-i3 and canine, roots of p3, p4 and partially broken off m1 crown. Type: "3D_surfaces" doi: 10.18563/m3.sf.1209   state:published

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Pachypanthera piriyai CUF-KR-2 View specimen

M3#1210 Paratype of Pachypanthera piriyai, a right hemi-maxilla with P3-P4, alveoli of C and M1, root of P2 Type: "3D_surfaces" doi: 10.18563/m3.sf.1210   state:published

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The present 3D Dataset contains the 3D model of the endocranial cast of Palaeolama sp. from the mid-Pleistocene (~1.2 Mya) of South America, analyzed in Balcarcel et al. 2023.
  

Palaeolama sp. PIMUZ A/V 4091 View specimen

M3#1128 3D model of a natural endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.1128   state:published

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The present 3D Dataset contains the 3D models analyzed in Mennecart B., Wazir W.A., Sehgal R.K., Patnaik R., Singh N.P., Kumar N, and Nanda A.C. 2021. New remains of Nalamaeryx (Tragulidae, Mammalia) from the Ladakh Himalaya and their phylogenetical and palaeoenvironmental implications. Historical Biology. https://doi.org/10.1080/08912963.2021.2014479
  

Nalameryx savagei WIMF/A4801 View specimen

M3#766 Nalameryx savagei, Partial lower right jaw preserving m2 and m3. Type: "3D_surfaces" doi: 10.18563/m3.sf.766   state:published

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Nalameryx savagei WIMF/A4802 View specimen

M3#767 Nalameryx savagei, partial lower right jaw preserving m2 and m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.767   state:published

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This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal A and Calvo JO 2021. Re-description of the braincase of the rebbachisaurid sauropod Limaysaurus tessonei and novel endocranial information based on CT scans. Anais da Academia Brasileira de Ciências 93(Suppl. 2): e20200762 https://doi.org/10.1590/0001-3765202120200762 

Limaysaurus tessonei MUCPv-205 View specimen

M3#700 Renderings of the virtually isolate braincase, brain, and right inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.700   state:published

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This contribution provides for the first time the 3D model of the type specimen of Molassitherium delemontense (Mammalia, Rhinocerotidae) described in the following publication: Becker et al. (2013), Journal of Systematic Palaeontology, Vol. 11, Issue 8, 947–972, https://doi.org/10.1080/14772019.2012.699007. Conservation issues of the specimen and solutions using 3D model and 3D prints are detailed. 

Molassitherium delemontense MJSN POI007–245 View specimen

M3#384 Skull of Molassitherium delemontense Becker and Antoine, 2013 (in Becker et al. 2013): holotype Type: "3D_surfaces" doi: 10.18563/m3.sf.384   state:published

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The present contribution contains the 3D model and dataset analyzed in the following publication: Scheyer, T. M., J. M. Neenan, T. Bodogan, H. Furrer, C. Obrist, and M. Plamondon. 2017. A new, exceptionally preserved juvenile specimen of Eusaurosphargis dalsassoi (Diapsida) and implications for Mesozoic marine diapsid phylogeny. Scientific Reports, https://doi.org/10.1038/s41598-017-04514-x . 

Eusaurosphargis dalsassoi PIMUZ A/III 4380 View specimen

	M3#179 94 extracted surfaces of skeletal elements of PIMUZ A/III 4380 Type: "3D_surfaces" doi: 10.18563/m3.sf.179   state:published	Download 3D surface file
	M3#180 Accompanying CT scan dataset Type: "3D_CT" doi: 10.18563/m3.sf.180   state:published	Download CT data

The present 3D Dataset contains the 3D models analyzed in: Abel P., Pommery Y., Ford D. P., Koyabu D., Werneburg I. 2022. Skull sutures and cranial mechanics in the Permian reptile Captorhinus aguti and the evolution of the temporal region in early amniotes. Frontiers in Ecology and Evolution. https://doi.org/10.3389/fevo.2022.841784
  

Captorhinus aguti OMNH 44816 View specimen

M3#965 Segmented cranial bone surfaces of OMNH 44816 Type: "3D_surfaces" doi: 10.18563/m3.sf.965   state:published

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The present 3D Dataset contains the 3D models of Carboniferous-Permian chondrichthyan neurocrania analyzed in “Phylogenetic implications of the systematic reassessment of Xenacanthiformes and ‘Ctenacanthiformes’ (Chondrichthyes) neurocrania from the Carboniferous-Permian Autun Basin (France)”. 

cf. Triodus sp MNHN.F.AUT811 View specimen

M3#834 MHNH.F.AUT811 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.834   state:published

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indet indet MNHN.F.AUT812 View specimen

M3#835 MHNH.F.AUT812 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.835   state:published

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indet indet MNHN.F.AUT813 View specimen

M3#836 MHNH.F.AUT813 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.836   state:published

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cf. Triodus sp MNHN.F.AUT814 View specimen

M3#837 MHNH.F.AUT814 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.837   state:published

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cf. Triodus sp MHNE.2021.9.1 View specimen

M3#838 MHNE.2021.9.1 (isolated neurocranium) in dorsal view. Type: "3D_surfaces" doi: 10.18563/m3.sf.838   state:published

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The present Dataset contains the 3D model of the male genital organs of greater horseshoe bat, Rhinolophus ferrumequinum. This is the first detailed 3D structure of the soft-tissue genital organs of bats. The 3D model was generated using microCT and techniques of virtual reconstruction. 

Rhinolophus ferrumequinum JP18-006 View specimen

M3#521 The genital organs of male greater horseshoe bat. Type: "3D_surfaces" doi: 10.18563/m3.sf.521   state:published

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This contribution contains the 3D model of the holotype of Simplomys hugi, the new dormouse species from the locality of Glovelier described and figured in the following publication: New data on the Miocene dormouse Simplomys García-Paredes, 2009 from the peri-alpin basins of Switzerland and Germany: palaeodiversity of a rare genus in Central Europe. https://doi.org/10.1007/s12549-018-0339-y 

Simplomys hugi MJSN-GLM017-0001 View specimen

M3#385 the left maxilla with four teeth ( DP4, P4, M1 and M2) Type: "3D_surfaces" doi: 10.18563/m3.sf.385   state:published

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The present 3D Dataset contains the 3D models analyzed in the article entitled "One skull to rule them all? Descriptive and comparative anatomy of the masticatory apparatus in five mice species based on traditional and digital dissections" (Ginot et al. 2018, Journal of Morphology, https://doi.org/10.1002/jmor.20845). 

Mus cervicolor R7314 View specimen

M3#343 .ply surfaces of the skull and masticatory muscles of Mus cervicolor. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.343   state:published

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Mus caroli R7264 View specimen

M3#344 .ply surfaces of the skull and masticatory muscles of Mus caroli. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.344   state:published

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Mus fragilicauda R7260 View specimen

M3#345 .ply surfaces of the skull and masticatory muscles of Mus fragilicauda. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.345   state:published

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Mus pahari R7226 View specimen

M3#346 .ply surfaces of the skull and masticatory muscles of Mus pahari. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.346   state:published

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Mus minutoides minutoides-1 View specimen

M3#347 .ply surfaces of the skull and masticatory muscles of Mus minutoides. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.347   state:published

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The present 3D Dataset contains the 3D models analyzed in: Hirose, A., Nakashima, T., Yamada, S., Uwabe, C., Kose, K., Takakuwa, T. 2012. Embryonic liver morphology and morphometry by magnetic resonance microscopic imaging.  Anat Rec (Hoboken) 295, 51-59. doi: 10.1002/ar.21496 

Homo sapiens KC-CS14LIV1387 View specimen

M3#64 Human liver at Carnegie Stage (CS) 14 Type: "3D_surfaces" doi: 10.18563/m3.sf.64   state:published

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Homo sapiens KC-CS15LIV5074 View specimen

M3#65 Human liver at Carnegie Stage (CS) 15 Type: "3D_surfaces" doi: 10.18563/m3.sf.65   state:published

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Homo sapiens KC-CS16LIV2578 View specimen

M3#66 Human liver at Carnegie Stage (CS) 16 Type: "3D_surfaces" doi: 10.18563/m3.sf.66   state:published

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Homo sapiens KC-CS17LIV17832 View specimen

M3#67 Human liver at Carnegie Stage (CS) 17 Type: "3D_surfaces" doi: 10.18563/m3.sf.67   state:published

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Homo sapiens KC-CS18LIV21124 View specimen

M3#68 Human liver at Carnegie Stage (CS) 18 Type: "3D_surfaces" doi: 10.18563/m3.sf.68   state:published

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Homo sapiens KC-CS19LIV14353 View specimen

M3#69 Human liver at Carnegie Stage (CS) 19 Type: "3D_surfaces" doi: 10.18563/m3.sf.69   state:published

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Homo sapiens KC-CS20LIV20701 View specimen

M3#70 Human liver at Carnegie Stage (CS) 20 Type: "3D_surfaces" doi: 10.18563/m3.sf.70   state:published

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Homo sapiens KC-CS21LIV25858 View specimen

M3#71 Human liver at Carnegie Stage (CS) 21 Type: "3D_surfaces" doi: 10.18563/m3.sf.71   state:published

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Homo sapiens KC-CS22LIV22226 View specimen

M3#72 Human liver at Carnegie Stage (CS) 22 Type: "3D_surfaces" doi: 10.18563/m3.sf.72   state:published

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Homo sapiens KC-CS23LIV25704 View specimen

M3#73 Human liver at Carnegie Stage (CS) 23 Type: "3D_surfaces" doi: 10.18563/m3.sf.73   state:published

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The present 3D Dataset contains the 3D models of the brain endocast analyzed in “Virtual brain endocast of Antifer (Mammalia: Cervidae), an extinct large cervid from South America”. 

Antifer ensenadensis U-4922 View specimen

M3#550 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.550   state:published

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Antifer ensenadensis MCN-PV 943 View specimen

M3#551 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.551   state:published

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The present 3D Dataset contains the 3D surface  model and the µCT scan analyzed in the following publication: R. Tabuce, R. Sarr, S. Adnet, R. Lebrun, F. Lihoreau, J. E. Martin, B. Sambou, M. Thiam, and L. Hautier: Filling a gap in the proboscidean fossil record: a new genus from the Lutetian of Senegal. Journal of Paleontology, in press, doi: 10.1017/jpa.2019.98
  

Saloumia gorodiskii MNHN.F.MCA 1 View specimen

	M3#500 Tooth 3D model of Saloumia gorodiskii Type: "3D_surfaces" doi: 10.18563/m3.sf500   state:published	Download 3D surface file
	M3#501 µCT scan of Saloumia gorodiskii Type: "3D_CT" doi: 10.18563/m3.sf501   state:published	Download CT data

The present 3D Dataset contains the 3D models analyzed in: Amson et al., Under review. Evolutionary Adaptation to Aquatic Lifestyle in Extinct Sloths Can Lead to Systemic Alteration of Bone Structure doi:10.1098/rspb.2018.0270. 

Bradypus tridactylus MNHN ZM-MO-1999-1065 View specimen

M3#337 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.337   state:published

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Choloepus didactylus MNHN-ZM-MO-1996-594 View specimen

M3#338 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.338   state:published

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Thalassocnus natans MNHN-F-SAS-734 View specimen

M3#339 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.339   state:published

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Thalassocnus littoralis MNHN-F-SAS-1610 View specimen

M3#340 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.340   state:published

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Thalassocnus littoralis MNHN-F-SAS-1615 View specimen

M3#341 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.341   state:published

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Thalassocnus carolomartini SMNK-3814 View specimen

M3#342 Brain endocast lacking right olfactory bulb Type: "3D_surfaces" doi: 10.18563/m3.sf.342   state:published

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This contribution contains the 3D models described and figured in: The Neogene record of northern South American native ungulates. Smithsonian Contributions to Paleobiology. Doi: 10.5479/si.1943-6688.101
  

Hilarcotherium miyou IGMp 881327 View specimen

M3#318 Right upper M2 Type: "3D_surfaces" doi: 10.18563/m3.sf.318   state:published

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Hilarcotherium miyou MUN-STRI 34216 View specimen

	M3#319 Right upper P4 Type: "3D_surfaces" doi: 10.18563/m3.sf.319   state:published	Download 3D surface file
	M3#320 Right upper M2 Type: "3D_surfaces" doi: 10.18563/m3.sf.320   state:published	Download 3D surface file

Falcontoxodon aguilerai AMU-CURS 585 View specimen

M3#321 Maxilla with left M3-P2 and right I2 Type: "3D_surfaces" doi: 10.18563/m3.sf.321   state:published

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The presented dataset contains the 3D surface scan of the holotype of Birgeria americana, a partial skull described and depicted in: Romano, C., Jenks, J.F., Jattiot, R., Scheyer, T.M., Bylund, K.G. & Bucher, H. 2017. Marine Early Triassic Actinopterygii from Elko County (Nevada, USA): implications for the Smithian equatorial vertebrate eclipse. Journal of Paleontology. https://doi.org/10.1017/jpa.2017.36 . 

Birgeria americana NMMNH P-66225 View specimen

M3#175 NMMNH P-66225 is from upper lower Smithian to lower upper Smithian beds (Thaynes Group). The collecting site is located about 2.75 km south-southeast of the Winecup Ranch, east-central Elko County, Nevada, USA. P-66225 is a partial skull preserved within a large limestone nodule, with its right side exposed. It preserves the portion between the cleithrum posteriorly, and the level of the hind margin of the orbital opening anteriorly. The fossil has a length of 26 cm. Type: "3D_surfaces" doi: 10.18563/m3.sf.175   state:published

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