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2025-12
Volume 11, issue 04
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ISSN: 2274-0422

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Page 5 of 10, showing 20 record(s) out of 199 total

3D atlas and comparative osteology of the middle ear ossicles among Eulipotyphla (Mammalia, Placentalia).
Daisuke Koyabu Logo
Published online: 03/05/2017

Keywords: aquatic adaptation; convergence; Eulipotyphla; fossorial adaptation; hearing

https://doi.org/10.18563/m3.3.2.e3

  Abstract

    Considerable morphological variations are found in the middle ear among mammals. Here I present a three-dimensional atlas of the middle ear ossicles of eulipotyphlan mammals. This group has radiated into various environments as terrestrial, aquatic, and subterranean habitats independently in multiple lineages. Therefore, eulipotyphlans are an ideal group to explore the form-function relationship of the middle ear ossicles. This comparative atlas of hedgehogs, true shrews, water shrews, mole shrews, true moles, and shrew moles encourages future studies of the middle ear morphology of this diverse group.
      

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Published in Volume 03, Issue 02 (2017)

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3D models related to the publication: Prenatal growth stages show the development of the ruminant bony labyrinth and petrosal bone.
Loïc Costeur Logo and Bastien Mennecart Logo
Published online: 19/10/2016

Keywords: bony labyrinth; foetus; ossification timing; phylogeny; Ruminantia

https://doi.org/10.18563/m3.2.2.e3

  Abstract

    The present 3D Dataset contains the 3D models analyzed in Costeur L., Mennecart B., Müller B., Schulz G., 2016. Prenatal growth stages show the development of the ruminant bony labyrinth and petrosal bone. Journal of Anatomy. https://doi.org/10.1111/joa.12549 

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Published in Volume 02, Issue 02 (2017)

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3D model related to the publication: An enigmatic aquatic snake from the Cenomanian of northern South America
Adriana Albino Logo, Jorge D. Carrillo-Briceño Logo and James, M. Neenan Logo
Published online: 24/05/2016

Keywords: aquatic; Cretaceous; Snake; South America; Vertebrae

https://doi.org/10.18563/m3.2.2.e2

  Abstract

    This contribution contains the 3D model described and figured in the following publication: Albino, A., Carrillo-Briceño, J. D. & Neenan, J. M. 2016. An enigmatic aquatic snake from the Cenomanian of northern South America. PeerJ 4:e2027 http://dx.doi.org/10.7717/peerj.2027 

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Published in Volume 02, Issue 02 (2017)

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Skeletogenesis during the late embryonic development of the catshark Scyliorhinus canicula (Chondrichthyes; Neoselachii)
Sébastien Enault, Sylvain Adnet Logo and Mélanie Debiais-Thibaud Logo
Published online: 25/04/2016

Keywords: Chondrichthyes; development; mineralization; Scyliorhinus canicula; skeleton

https://doi.org/10.18563/m3.1.4.e2

  Abstract

    Current knowledge on the skeletogenesis of Chondrichthyes is scarce compared with their extant sister group, the bony fishes. Most of the previously described developmental tables in Chondrichthyes have focused on embryonic external morphology only. Due to its small body size and relative simplicity to raise eggs in laboratory conditions, the small-spotted catshark Scyliorhinus canicula has emerged as a reference species to describe developmental mechanisms in the Chondrichthyes lineage. Here we investigate the dynamic of mineralization in a set of six embryonic specimens using X-ray microtomography and describe the developing units of both the dermal skeleton (teeth and dermal scales) and endoskeleton (vertebral axis). This preliminary data on skeletogenesis in the catshark sets the first bases to a more complete investigation of the skeletal developmental in Chondrichthyes. It should provide comparison points with data known in osteichthyans and could thus be used in the broader context of gnathostome skeletal evolution. 

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Published in Volume 01, Issue 04 (2016)

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3D models related to the publication: Morphology of the human embryonic brain and ventricles
Naoki Shiraishi Logo, Airi Katayama, Takashi Nakashima, Naoto Shiraki, Shigehito Yamada Logo, Chigako Uwabe, Katsumi Kose Logo and Tetsuya Takakuwa Logo
Published online: 27/07/2015

Keywords: human brain; human embryo; magnetic resonance imaging; three-dimensional reconstruction

https://doi.org/10.18563/m3.1.3.e3

  Abstract

    This contribution contains the 3D models described and figured in the following publication: Shiraishi N et al. Morphology and morphometry of the human embryonic brain: A three-dimensional analysis NeuroImage 115, 2015, 96-103, DOI: 10.1016/j.neuroimage.2015.04.044.

      

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Published in Volume 01, Issue 03 (2015)

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A 3D geometric morphometric dataset quantifying skeletal variation in birds
Alexander Bjarnason Logo and Roger Benson Logo
Published online: 09/02/2021

Keywords: birds; geometric morphometrics; macroevolution; Morphology; skeleton

https://doi.org/10.18563/journal.m3.125

  Abstract

    Macroevolution is integral to understanding the patterns of the diversification of life. As the life sciences increasingly use big data approaches, large multivariate datasets are required to test fundamental macroevolutionary hypotheses. In vertebrate evolution, large datasets have been created to quantify morphological variation, largely focusing on particular areas of the skeleton. We provide a landmarking protocol to quantify morphological variation in skeletal elements across the head, trunk, hindlimb and forelimb using 3-dimensional landmarks and semilandmarks, and present a large pan-skeletal database of bird morphology for 149 taxa across avian phylogeny using CT scan data. This large collection of 3D models and geometric morphometric data is open access and can be used in the future for new research, teaching and outreach. The 3D models and CT scans of the 149 specimens related to this project can be downloaded at MorphoSource (https://www.morphosource.org/projects/00000C420

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Published in Volume 07, issue 01 (2021)

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S.I. Data
3D models related to the publication: A new traversodontid cynodont with a peculiar postcanine dentition from the Middle/Late Triassic of Namibia and dental evolution in basal gomphodonts.
Christophe Hendrickx Logo, Leandro C. Gaetano Logo, Jonah N. Choiniere Logo, Helke Mocke Logo and Fernando Abdala
Published online: 22/09/2020

Keywords: Cynodontia; Gomphodontia; postcanine; teeth; Traversodontidae

https://doi.org/10.18563/journal.m3.123

  Abstract

    The present 3D Dataset contains the 3D models analyzed in Hendrickx, C., Gaetano, L. C., Choiniere, J., Mocke, H. and Abdala, F. in press. A new traversodontid cynodont with a peculiar postcanine dentition from the Middle/Late Triassic of Namibia and dental evolution in basal gomphodonts. Journal of Systematic Palaeontology

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Published in Volume 06, issue 05 (2020)

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3D models related to the publication: Brief comment on the brain and inner ear of Giganotosaurus carolinii (Dinosauria: Theropoda) based on CT scans.
Mauro N. Nieto Logo and Ariana Paulina-Carabajal Logo
Published online: 01/04/2020

Keywords: Carcharodontosauridae; Cranial endocast; CT scans; Endosseous Labyrinth; Paleoneurology

https://doi.org/10.18563/journal.m3.108

  Abstract

    This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal, A. and Nieto, M. N. In press. Brief comment on the brain and inner ear of Giganotosaurus carolinii (Dinosauria: Theropoda) based on CT scans. Ameghiniana. https://doi.org/10.5710/AMGH.25.10.2019.3237
      

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Published in Volume 06, issue 02 (2020)

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3D model related to the publication: Small within the largest: Brain size and anatomy of the extinct Neoepiblema acreensis, a giant rodent from the Neotropics
José D. Ferreira Logo, Francisco R. Negri Logo, Marcelo R. Sánchez-Villagra Logo and Leonardo Kerber Logo
Published online: 02/03/2020

Keywords: brain endocast.; Caviomorpha; Endocranium; palaeobiology

https://doi.org/10.18563/journal.m3.107

  Abstract

    The present 3D Dataset contains the 3D model of the brain endocast of Neoepiblema acreensis analyzed in “Small within the largest: Brain size and anatomy of the extinct Neoepiblema acreensis, a giant rodent from the Neotropics”. The 3D model was generated using CT-Scanning and techniques of virtual reconstruction.
      

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Published in Volume 06, issue 01 (2020)

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3D models related to the publication: Internal tooth structure and burial practices: insights into the Neolithic necropolis of Gurgy (France, 5100-4000 cal. BC).
Mona Le Luyer Logo, Michael Coquerelle Logo, Stéphane Rottier Logo and Priscilla Bayle Logo
Published online: 25/07/2016

Keywords: modern humans; Neolithic; upper permanent second molars

https://doi.org/10.18563/m3.2.1.e1

  Abstract

    The present 3D Dataset contains the 3D models of external and internal aspects of human upper permanent second molars from the Neolithic necropolis analyzed in the following publication: Le Luyer M., Coquerelle M., Rottier S., Bayle P. (2016): Internal tooth structure and burial practices: insights into the Neolithic necropolis of Gurgy (France, 5100-4000 cal. BC). Plos One 11(7): e0159688. doi: 10.1371/journal.pone.0159688

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Published in Volume 02, Issue 01 (2016)

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3D models related to the publication: Dental morphology evolution in early peratheriines, including a new morphologically cryptic species and findings on the largest early Eocene European metatherian.
Killian Gernelle Logo, Marc Godinot Logo, Bernard Marandat, Dominique Téodori, Sandrine Ladevèze Logo and Rodolphe Tabuce Logo
Published online: 06/01/2025

Keywords: France; Herpetotheriidae; molars; systematics; Ypresian

https://doi.org/10.18563/journal.m3.255

  Abstract

    This contribution contains the three-dimensional models of the most informative fossil material attributed to both Peratherium musivum Gernelle, 2024, and Peratherium maximum (Crochet, 1979), respectively from early and middle early Eocene French localities. These specimens, which document the emergence of the relatively large peratheriines, were analyzed and discussed in: Gernelle et al. (2024), Dental morphology evolution in early peratheriines, including a new morphologically cryptic species and findings on the largest early Eocene European metatherian. https://doi.org/10.1080/08912963.2024.2403602
      

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Published in Volume 11, issue 01 (2025)

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3D model related to the publication: The largest freshwater odontocete: a South Asian river dolphin relative from the Proto-Amazonia
Aldo Benites-Palomino Logo, Gabriel Aguirre-Fernández Logo, Patrice Baby, Diana Ochoa Logo, Ali Altamirano-Sierra Logo, John J. Flynn Logo, Marcelo R. Sánchez-Villagra Logo, Julia Tejeda Logo, Christian de Muizon Logo and Rodolfo Salas-Gismondi Logo
Published online: 21/03/2024

Keywords: Miocene; Odontoceti; Platanistidae; River dolphin

https://doi.org/10.18563/journal.m3.221

  Abstract

    The present 3D Dataset contains the 3D model analyzed in The largest freshwater odontocete: a South Asian river dolphin relative from the Proto-Amazonia. 

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Published in Volume 10, issue 01 (2024)

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3D models related to the publication: Exon capture museomics deciphers the nine-banded armadillo species complex and identifies a new species endemic to the Guiana Shield.
Mathilde Barthe Logo, Lionel Hautier Logo, Guillaume Billet Logo, Anderson Feijó Logo, Benoit Moison Logo, Benoît de Thoisy Logo, François Catzeflis Logo and Frédéric Delsuc Logo
Published online: 28/06/2024

Keywords: carapace; Dasypus guianensis; holotype; skeleton; Xenarthra

https://doi.org/10.18563/journal.m3.204

  Abstract

    This contribution contains 3D models of the holotype of a new species of long-nosed armadillos, the Guianan long-nosed armadillo (Dasypus guianensis) described in the following publication: Barthe M., Rancilhac L., Arteaga M. C., Feijó A., Tilak M.-K., Justy F., Loughry W. J., McDonough C. M., de Thoisy B., Catzeflis F., Billet G., Hautier L., Nabholz B., and Delsuc F. 2024. Exon capture museomics deciphers the nine-banded armadillo species complex and identifies a new species endemic to the Guiana Shield. Systematic Biology, syae027. https://doi.org/10.1093/sysbio/syae027
      

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Published in Volume 10, issue 02 (2024)

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3D models related to the publication: New remains of Nalamaeryx (Tragulidae, Mammalia) from the Ladakh Himalaya and their phylogenetical and palaeoenvironmental implications
Wasim A. Wazir Logo, Bastien Mennecart Logo, Ramesh K. Sehgal, Navin Kumar, Piyush Uniyal Logo, Rajeev Patnaik Logo and Rohit Kumar
Published online: 03/01/2022

Keywords: Ladakh Himalaya; Mandibles; Nalameryx; Oligocene; ruminant

https://doi.org/10.18563/journal.m3.142

  Abstract

    The present 3D Dataset contains the 3D models analyzed in Mennecart B., Wazir W.A., Sehgal R.K., Patnaik R., Singh N.P., Kumar N, and Nanda A.C. 2021. New remains of Nalamaeryx (Tragulidae, Mammalia) from the Ladakh Himalaya and their phylogenetical and palaeoenvironmental implications. Historical Biology. https://doi.org/10.1080/08912963.2021.2014479
      

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Published in Volume 08, issue 01 (2022)

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3D model related to the publication: Cranial Anatomy of Indohyus indirae (Raoellidae), an artiodactyl from the Eocene of India, and its implications for raoellid biology
Sonam Patel, Avinash C. Nanda, Maëva J. Orliac Logo and J. G. M. Thewissen Logo
Published online: 25/09/2024

Keywords: Artiodactyla; Cetacea; skull anatomy

https://doi.org/10.18563/journal.m3.216

  Abstract

    The present 3D Dataset contains the 3D model of the skull of the raoellid Indohyus indirae described in Patel et al. 2024.
      

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Published in Volume 10, issue 03 (2024)

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3D models related to the publication: Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus
Catherine Girard, Anne-Lise Charruault Logo, Thomas Gluck, Carlo Corradini Logo and Sabrina Renaud Logo
Published online: 08/02/2022

Keywords: Conodonts; geometric morphometrics; Late Devonian; ontogenetic trajectory

https://doi.org/10.18563/journal.m3.161

  Abstract

    This contribution contains the 3D models of a set of Famennian conodont elements belonging to the species Icriodus alternatus analyzed in the following publication: Girard et al. 2022: Deciphering the morphological variation and its ontogenetic dynamics in the Late Devonian conodont Icriodus alternatus

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Published in Volume 08, issue 01 (2022)

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3D models related to the publication: An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico
Laurent Marivaux Logo, Jorge Velez-Juarbe Logo and Pierre-Olivier Antoine Logo
Published online: 16/07/2021

Keywords: Caribbean islands; Geomorpha; Paleobiogeography; Paleogene; Rodentia

https://doi.org/10.18563/journal.m3.128

  Abstract

    This contribution provides the raw files for the μCT-scan data and renderings of the three-dimensional digital models of two fossil teeth of a geomyin geomorph rodent (Caribeomys merzeraudi), discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described, figured and discussed in the following publication: Marivaux et al. (2021), An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico. Papers in Palaeontology. https://doi.org/10.1002/spp2.1388 

  Specimens

    Caribeomys merzeraudi LACM 162478 View specimen

    M3#712

    Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.712   state:published




    Download 3D surface file

    M3#714

    5µm µCT data set . Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France).

    Type: "3D_CT"

    doi: 10.18563/m3.sf.714   state:published




    Download CT data

    Caribeomys merzeraudi LACM 162449 View specimen

    M3#713

    Right lower molar (m1 or m2). The specimen was scanned with a resolution of 4.5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.713   state:published




    Download 3D surface file

    M3#715

    µCT data at 4.5µm

    Type: "3D_CT"

    doi: 10.18563/m3.sf.715   state:published




    Download CT data


 
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Published in Volume 07, issue 03 (2021)

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3D models related to the publication: Neotropics provide insights into the emergence of New World monkeys: new dental evidence from the late Oligocene of Peruvian Amazonia
Laurent Marivaux Logo, Rodolfo Salas-Gismondi Logo and Pierre-Olivier Antoine Logo
Published online: 13/09/2017

Keywords: Homunculidae; Paleogene; Peru; Soriacebinae; South America

https://doi.org/10.18563/m3.3.1.e1

  Abstract

    This contribution contains the 3D models of the isolated teeth of Canaanimico amazonensis, a new stem platyrrhine primate, described and figured in the following publication: Marivaux et al. (2016), Neotropics provide insights into the emergence of New World monkeys: new dental evidence from the late Oligocene of Peruvian Amazonia. Journal of Human Evolution. http://dx.doi.org/10.1016/j.jhevol.2016.05.011
      

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Published in Volume 03, Issue 01 (2017)

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S.I. Data
3D model related to the publication: New turtles from the Late Cretaceous of Monte Alto-SP, Brazil, including cranial osteology, neuroanatomy and phylogenetic position of a new taxon.
Gabriel S. Ferreira Logo, Fabiano V. Iori Logo, Guilherme Hermanson Logo and Max C. Langer Logo
Published online: 01/02/2018

Keywords: carotid circulation; microcomputed tomography; neuroanatomy; Pleurodira; Podocnemidoidae

https://doi.org/10.18563/m3.3.2.e2

  Abstract

    This contribution contains the 3D model described and figured in the following publication: New turtles from the Late Cretaceous of Monte Alto-SP, Brazil, including cranial osteology, neuroanatomy and phylogenetic position of a new taxon. PalZ. https://doi.org/10.1007/s12542-017-0397-x 

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Published in Volume 03, Issue 02 (2017)

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S.I. Data
3D models related to the publication: Morphogenesis of the stomach during the human embryonic period
Ami Nako, Norihito Kaigai, Naoto Shiraki, Shigehito Yamada Logo, Chigako Uwabe, Katsumi Kose Logo and Tetsuya Takakuwa Logo
Published online: 16/11/2015

Keywords: human embryo; human stomach; magnetic resonance imaging; three-dimensional reconstruction

https://doi.org/10.18563/m3.1.4.e3

  Abstract

    The present 3D Dataset contains the 3D models analyzed in: Kaigai N et al. Morphogenesis and three-dimensional movement of the stomach during the human embryonic period, Anat Rec (Hoboken). 2014 May;297(5):791-797. doi: 10.1002/ar.22833. 

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Published in Volume 01, Issue 04 (2016)

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Page 5 of 10, showing 20 record(s) out of 199 total