The present 3D Dataset contains the 3D models analyzed in Mennecart B., Métais G., Costeur L., Ginsburg L, and Rössner G. 2021, Reassessment of the enigmatic ruminant Miocene genus Amphimoschus Bourgeois, 1873 (Mammalia, Artiodactyla, Pecora). PlosOne. https://doi.org/10.1371/journal.pone.0244661 

Amphimoschus ponteleviensis MNHN.F.AR3266 View specimen

	M3#701 Surface scan of the cast of the skull of Amphimoschus ponteleviensis MNHN.F.AR3266 from Artenay (France) Type: "3D_surfaces" doi: 10.18563/m3.sf.701   state:published	Download 3D surface file
	M3#702 Right petrosal bone and bony labyrinth of the skull MNHN.F.AR3266 from Artenay (France) Type: "3D_surfaces" doi: 10.18563/m3.sf.702   state:published	Download 3D surface file

Amphimoschus ponteleviensis SMNS40693 View specimen

M3#704 Left petrosal bone and bony labyrinth of the skull SMNS40693 from Langenau 1 (Germany) Type: "3D_surfaces" doi: 10.18563/m3.sf.704   state:published

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The present 3D Dataset contains the 3D models analyzed in Hendrickx, C., Gaetano, L. C., Choiniere, J., Mocke, H. and Abdala, F. in press. A new traversodontid cynodont with a peculiar postcanine dentition from the Middle/Late Triassic of Namibia and dental evolution in basal gomphodonts. Journal of Systematic Palaeontology. 

Etjoia dentitransitus GSN F1591 View specimen

	M3#557 Surface model derived from µCT data of the holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.557   state:published	Download 3D surface file
	M3#558 Photogrammetric 3D surface model of the postcanines of the Holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.558   state:published	Download 3D surface file
	M3#559 Photogrammetric 3D surface model of the Holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.559   state:published	Download 3D surface file

This contribution contains 3D models of extinct rodents Dinomyidae from Miocene and Quaternary of Brazil. The Miocene specimens that were digitalized include the holotypes of Potamarchus adamiae, Pseudopotamarchus villanuevai, and Ferigolomys pacarana collected in the Solimões Formation (Upper Miocene), northern Brazil. The Quaternary specimens are the holotype and paratype of Niedemys piauiensis, found in Upper Pleistocene deposits from northeast Brazil. 

Potamarchus adamiae UFAC-CS 011 View specimen

M3#410 UFAC-CS 011 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.410   state:published

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Potamarchus adamiae UFAC-CS 043 View specimen

M3#411 UFAC-CS 043, left dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.411   state:published

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Pseudopotamarchus villanuevai UFAC 4762 View specimen

M3#412 UFAC 4762 – holotype, incomplete right maxilla with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.412   state:published

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Ferigolomys pacarana UFAC 6460 View specimen

M3#413 UFAC 6460 – holotype, palatal region of the skull with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.413   state:published

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Drytomomys sp. UFAC 2742 View specimen

M3#414 UFAC 2742, right dentary with cheek teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.414   state:published

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Niedemys piauiensis FUMDHAM 113-146365-2 View specimen

M3#418 FUMDHAM 113-146365-2 - holotype, upper right tooth Type: "3D_surfaces" doi: 10.18563/m3.sf.418   state:published

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Niedemys piauiensis FUMDHAM 113-145304-2 View specimen

M3#419 FUMDHAM 113-145304-2 - paratype, left lower molar Type: "3D_surfaces" doi: 10.18563/m3.sf.419   state:published

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In this contribution, we describe the external and internal morphology of a delphinid petrosal bone collected from Ahu Tahai, a burial site located on the Southwestern coast of Easter Island, at Hangaroa. We discuss the taxonomic attribution of this archaeological item and describe its internal structures based on µCT data, including the bony labyrinth and the nerve and vein patterns. Identification of the nerves exists lead us to relocate the identification of the foramen singulare in delphinid petrosals.

  

indet. indet. AT1 View specimen

	M3#420 Stapes Type: "3D_surfaces" doi: 10.18563/m3.sf.420   state:published	Download 3D surface file
	M3#421 petrosal bone Type: "3D_surfaces" doi: 10.18563/m3.sf.421   state:published	Download 3D surface file
	M3#422 in situ bony labyrinth Type: "3D_surfaces" doi: 10.18563/m3.sf.422   state:published	Download 3D surface file
	M3#423 bony labyrinth and associated nerves and blood vessels Type: "3D_surfaces" doi: 10.18563/m3.sf.423   state:published	Download 3D surface file

This contribution provides for the first time the 3D model of the type specimen of Molassitherium delemontense (Mammalia, Rhinocerotidae) described in the following publication: Becker et al. (2013), Journal of Systematic Palaeontology, Vol. 11, Issue 8, 947–972, https://doi.org/10.1080/14772019.2012.699007. Conservation issues of the specimen and solutions using 3D model and 3D prints are detailed. 

Molassitherium delemontense MJSN POI007–245 View specimen

M3#384 Skull of Molassitherium delemontense Becker and Antoine, 2013 (in Becker et al. 2013): holotype Type: "3D_surfaces" doi: 10.18563/m3.sf.384   state:published

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This contribution contains the 3D models of the fossil remains (maxilla, dentary, and talus) attributed to Djebelemur martinezi, a ca. 50 Ma primate from Tunisia (Djebel Chambi), described and figured in the following publication: Marivaux et al. (2013), Djebelemur, a tiny pre-tooth-combed primate from the Eocene of Tunisia: a glimpse into the origin of crown strepsirhines. PLoS ONE. https://doi.org/10.1371/journal.pone.0080778  

Djebelemur martinezi CBI-1-544 View specimen

M3#365 CBI-1-544, left maxilla preserving P3-M3 and alveoli for P2 and C1 Type: "3D_surfaces" doi: 10.18563/m3.sf.365   state:published

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Djebelemur martinezi CBI-1-567 View specimen

M3#363 Isolated left upper P4 Type: "3D_surfaces" doi: 10.18563/m3.sf.363   state:published

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Djebelemur martinezi CBI-1-565-577-587-580 View specimen

M3#366 - CBI-1-565, a damaged right mandible, which consists of three isolated pieces found together and reassembled here: the anterior part of the dentary bears the p3 and m1, and alveoli for p4, p2 and c, while the posterior part preserves m3 and a portion of the ascending ramus; the m2 was found isolated but in the same small calcareous block treated by acid processing. - CBI-1-577, isolated right lower p4. - CBI-1-587, isolated left lower p2 (reversed). - CBI-1-580, isolated left lower canine (reversed). Type: "3D_surfaces" doi: 10.18563/m3.sf.366   state:published

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Djebelemur martinezi CBI-1-545 View specimen

M3#364 Right Talus Type: "3D_surfaces" doi: 10.18563/m3.sf.364   state:published

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The present 3D Dataset contains the 3D model analyzed in the following publication: Solé et al. (2018), Niche partitioning of the European carnivorous mammals during the paleogene. Palaios. https://doi.org/10.2110/palo.2018.022 

Hyaenodon leptorhynchus FSL848325 View specimen

M3#336 The specimen FSL848325 is separated in two fragments: the anterior part bears the incisors, the deciduous and permanent canines, while the posterior part bears the right P3, P4, M1 and M2. The P2 is isolated. When combined, the cranium length is approximatively 10.5 cm long. The anterior part is 6.9 cm long and 2.15 cm wide (taken at the level of the P1). The posterior part is 4.8 cm long. The anterior part of the cranium is very narrow. Type: "3D_surfaces" doi: 10.18563/m3.sf.336   state:published

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This note presents the 3D model of the hemi-mandible UM-PAT 159 of the MP7 Diacodexis species D. cf. gigasei and 3D models corresponding to the restoration of the ascending ramus, broken on the original specimen, and to a restoration of a complete mandible based on the preserved left hemi-mandible.  

Diacodexis cf. gigasei UMPAT159 View specimen

	M3#315 3D models of UM PAT 159 after the restoration of the ascending ramus Type: "3D_surfaces" doi: 10.18563/m3.sf.315   state:published	Download 3D surface file
	M3#316 restoration of a complete mandible based on the preserved left hemi-mandible UM PAT 159 Type: "3D_surfaces" doi: 10.18563/m3.sf.316   state:published	Download 3D surface file
	M3#317 3D model of the hemi-mandible UM PAT 159 Type: "3D_surfaces" doi: 10.18563/m3.sf.317   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models analyzed in: Hirose, A., Nakashima, T., Yamada, S., Uwabe, C., Kose, K., Takakuwa, T. 2012. Embryonic liver morphology and morphometry by magnetic resonance microscopic imaging.  Anat Rec (Hoboken) 295, 51-59. doi: 10.1002/ar.21496 

Homo sapiens KC-CS14LIV1387 View specimen

M3#64 Human liver at Carnegie Stage (CS) 14 Type: "3D_surfaces" doi: 10.18563/m3.sf.64   state:published

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Homo sapiens KC-CS15LIV5074 View specimen

M3#65 Human liver at Carnegie Stage (CS) 15 Type: "3D_surfaces" doi: 10.18563/m3.sf.65   state:published

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Homo sapiens KC-CS16LIV2578 View specimen

M3#66 Human liver at Carnegie Stage (CS) 16 Type: "3D_surfaces" doi: 10.18563/m3.sf.66   state:published

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Homo sapiens KC-CS17LIV17832 View specimen

M3#67 Human liver at Carnegie Stage (CS) 17 Type: "3D_surfaces" doi: 10.18563/m3.sf.67   state:published

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Homo sapiens KC-CS18LIV21124 View specimen

M3#68 Human liver at Carnegie Stage (CS) 18 Type: "3D_surfaces" doi: 10.18563/m3.sf.68   state:published

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Homo sapiens KC-CS19LIV14353 View specimen

M3#69 Human liver at Carnegie Stage (CS) 19 Type: "3D_surfaces" doi: 10.18563/m3.sf.69   state:published

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Homo sapiens KC-CS20LIV20701 View specimen

M3#70 Human liver at Carnegie Stage (CS) 20 Type: "3D_surfaces" doi: 10.18563/m3.sf.70   state:published

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Homo sapiens KC-CS21LIV25858 View specimen

M3#71 Human liver at Carnegie Stage (CS) 21 Type: "3D_surfaces" doi: 10.18563/m3.sf.71   state:published

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Homo sapiens KC-CS22LIV22226 View specimen

M3#72 Human liver at Carnegie Stage (CS) 22 Type: "3D_surfaces" doi: 10.18563/m3.sf.72   state:published

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Homo sapiens KC-CS23LIV25704 View specimen

M3#73 Human liver at Carnegie Stage (CS) 23 Type: "3D_surfaces" doi: 10.18563/m3.sf.73   state:published

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Current knowledge on the skeletogenesis of Chondrichthyes is scarce compared with their extant sister group, the bony fishes. Most of the previously described developmental tables in Chondrichthyes have focused on embryonic external morphology only. Due to its small body size and relative simplicity to raise eggs in laboratory conditions, the small-spotted catshark Scyliorhinus canicula has emerged as a reference species to describe developmental mechanisms in the Chondrichthyes lineage. Here we investigate the dynamic of mineralization in a set of six embryonic specimens using X-ray microtomography and describe the developing units of both the dermal skeleton (teeth and dermal scales) and endoskeleton (vertebral axis). This preliminary data on skeletogenesis in the catshark sets the first bases to a more complete investigation of the skeletal developmental in Chondrichthyes. It should provide comparison points with data known in osteichthyans and could thus be used in the broader context of gnathostome skeletal evolution. 

Scyliorhinus canicula SC6_2_2015_03_20 View specimen

M3#50 Mineralized skeleton of a 6,2 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.50   state:published

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Scyliorhinus canicula SC6_7_2015_03_20 View specimen

M3#51 Mineralized skeleton of a 6,7 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.51   state:published

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Scyliorhinus canicula SC7_1_2015_04_03 View specimen

M3#52 Mineralized skeleton of a 7,1 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.52   state:published

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Scyliorhinus canicula SC7_5_2015_03_13 View specimen

M3#53 Mineralized skeleton of a 7,5 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.53   state:published

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Scyliorhinus canicula SC8_2015_03_20 View specimen

M3#54 Mineralized skeleton of a 8 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.54   state:published

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Scyliorhinus canicula SC10_2015_02_27 View specimen

M3#55 Mineralized skeleton of a 10 cm long embryo of Scyliorhinus canicula Type: "3D_surfaces" doi: 10.18563/m3.sf.55   state:published

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The present 3D Dataset contains the 3D models of Protocetus atavus described and figured in the following publication: Berger et al. (2025) The endocranial anatomy of Protocetids and its implications for early whale evolution.
  

Protocetus atavus SMNS-P-11084 View specimen

	M3#1654 Textured model of the whole skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1654   state:published	Download 3D surface file
	M3#1655 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.1655   state:published	Download 3D surface file

This contribution contains the three-dimensional models of the most informative fossil material attributed to both Peratherium musivum Gernelle, 2024, and Peratherium maximum (Crochet, 1979), respectively from early and middle early Eocene French localities. These specimens, which document the emergence of the relatively large peratheriines, were analyzed and discussed in: Gernelle et al. (2024), Dental morphology evolution in early peratheriines, including a new morphologically cryptic species and findings on the largest early Eocene European metatherian. https://doi.org/10.1080/08912963.2024.2403602
  

Peratherium musivum MNHN.F.SN122 View specimen

M3#1640 3D surface model of MNHN.F.SN122, right M3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1640   state:published

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Peratherium musivum MNHN.F.RI220 View specimen

M3#1641 3D surface model of MNHN.F.RI220, left M2 (partial) Type: "3D_surfaces" doi: 10.18563/m3.sf.1641   state:published

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Peratherium musivum MNHN.F.RI296 View specimen

M3#1642 3D surface model of MNHN.F.RI296, right M1 (partial) Type: "3D_surfaces" doi: 10.18563/m3.sf.1642   state:published

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Peratherium musivum MNHN.F.RI368 View specimen

M3#1643 3D surface model of MNHN.F.RI368, right m2 Type: "3D_surfaces" doi: 10.18563/m3.sf.1643   state:published

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Peratherium musivum MNHN.F.RI385 View specimen

M3#1644 3D surface model of MNHN.F.RI385, left m1 Type: "3D_surfaces" doi: 10.18563/m3.sf.1644   state:published

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Peratherium maximum UM-BRI-17 View specimen

M3#1645 3D surface model of UM-BRI-17, right hemi-mandible with p1-p3, m1-m3 alveoli, and m4 Type: "3D_surfaces" doi: 10.18563/m3.sf.1645   state:published

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The holotype of Hamadasuchus rebouli Buffetaut 1994 from the Kem Kem beds of Morocco (Late Albian – Cenomanian) consists of a left dentary which is limited, fragmentary and reconstructed in some areas. To aid in assessing if the original diagnosis can be considered as valid, the specimen was CT scanned for the first time. This is especially important to resolve the taxonomic status of certain specimens that have been assigned to Hamadasuchus rebouli since then. The reconstructed structures in this contribution are in agreement with the original description, notably in terms of alveolar count; thus the original diagnosis of this taxon remains valid and some specimens are not referable to H. rebouli anymore. 

Hamadasuchus rebouli MDE C001 View specimen

	M3#1402 Dentary and teeth Type: "3D_surfaces" doi: 10.18563/m3.sf.1402   state:published	Download 3D surface file
	M3#1403 Toothmarks Type: "3D_surfaces" doi: 10.18563/m3.sf.1403   state:published	Download 3D surface file

This contribution contains the 3D models described and figured in the following publication: Bonis et al. 2023. A new large pantherine and a sabre-toothed cat (Mammalia, Carnivora, Felidae) from the late Miocene hominoid-bearing Khorat sand pits, Nakhon Ratchasima Province, northeastern Thailand. The Science of Nature 110(5):42. https://doi.org/10.1007/s00114-023-01867-4
  

Pachypanthera piriyai CUF-KR-1 View specimen

M3#1209 Holotype of Pachypanthera piriyai, a left hemi-mandible with alveoli for i1-i3 and canine, roots of p3, p4 and partially broken off m1 crown. Type: "3D_surfaces" doi: 10.18563/m3.sf.1209   state:published

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Pachypanthera piriyai CUF-KR-2 View specimen

M3#1210 Paratype of Pachypanthera piriyai, a right hemi-maxilla with P3-P4, alveoli of C and M1, root of P2 Type: "3D_surfaces" doi: 10.18563/m3.sf.1210   state:published

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This contribution contains 3D models of the holotype of a new species of long-nosed armadillos, the Guianan long-nosed armadillo (Dasypus guianensis) described in the following publication: Barthe M., Rancilhac L., Arteaga M. C., Feijó A., Tilak M.-K., Justy F., Loughry W. J., McDonough C. M., de Thoisy B., Catzeflis F., Billet G., Hautier L., Nabholz B., and Delsuc F. 2024. Exon capture museomics deciphers the nine-banded armadillo species complex and identifies a new species endemic to the Guiana Shield. Systematic Biology, syae027. https://doi.org/10.1093/sysbio/syae027
  

Dasypus guianensis MNHN-ZM-MO-2001-1317 View specimen

	M3#1200 Skeleton and carapace Type: "3D_surfaces" doi: 10.18563/m3.sf.1200   state:published	Download 3D surface file
	M3#1201 Frontal sinuses Type: "3D_surfaces" doi: 10.18563/m3.sf.1201   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models analyzed in Pochat-Cottilloux Y., Rinder N., Perrichon G., Adrien J., Amiot R., Hua S. & Martin J. E. (2023). The neuroanatomy and pneumaticity of Hamadasuchus from the Cretaceous of Morocco and its significance for the paleoecology of Peirosauridae and other altirostral crocodylomorphs. Journal of Anatomy, https://doi.org/10.1111/joa.13887 

Hamadasuchus sp. UCBL-FSL 532408 View specimen

	M3#1094 3D volume reconstruction of the braincase osteology Type: "3D_surfaces" doi: 10.18563/m3.sf.1094   state:published	Download 3D surface file
	M3#1096 3D volume reconstruction of the endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.1096   state:published	Download 3D surface file
	M3#1097 3D volume reconstruction of the labyrinths Type: "3D_surfaces" doi: 10.18563/m3.sf.1097   state:published	Download 3D surface file
	M3#1098 3D volume reconstruction of the pneumatic cavities Type: "3D_surfaces" doi: 10.18563/m3.sf.1098   state:published	Download 3D surface file

The present 3D Dataset contains the 3D model analyzed in Presence of the ground sloth Valgipes bucklandi (Xenarthra, Folivora, Scelidotheriinae) in southern Uruguay during the Late Pleistocene: Ecological and biogeographical implications. Quaternary International. https://doi.org/10.1016/j.quaint.2021.06.011 

Valgipes bucklandi CAV 1573 View specimen

M3#797 Left tibia-fibula Type: "3D_surfaces" doi: 10.18563/m3.sf.797   state:published

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This contribution contains the 3D models described and figured in the following publication: Kassegne K. E., Mourlam M. J., Guinot G., Amoudji Y. Z., Martin J. E., Togbe K. A., Johnson A. K., Hautier L. 2021. First partial cranium of Togocetus from Kpogamé (Togo) and the protocetid diversity in the Togolese phosphate basin. Annales de Paléontologie, Issue 2, April–June 2021, 102488. https://doi.org/10.1016/j.annpal.2021.102488  

Togocetus cf. traversei ULDG-KPO1 View specimen

	M3#768 The specimen consists of a partial cranium prepared out of a calcareous phosphate matrix. The partial cranium lacks the anterior part of the rostrum, the cranial roof, and most of the basicranium apart from the left zygomatic process of the squamosal. The maxilla, nasal, palatine, pterygoid, alisphenoid, and squamosal bones are preserved, as well as two incomplete dental rows described hereafter. Type: "3D_surfaces" doi: 10.18563/m3.sf.768   state:published	Download 3D surface file
	M3#770 µCT . Resolution: 0.3156mm. This scan can easily be opened with Fiji, MorphoDig, 3DSlicer, or any software that reads .MHD file format. Also, the .RAW file can be opened easily with other software such as Avizo/Amira when providing the correct dimensions (which are enclosed within the file name) Type: "3D_CT" doi: 10.18563/m3.sf.770   state:published	Download CT data

The present 3D Dataset contains the 3D model of a specimen of Metamynodon planifrons (UNISTRA.2015.0.1106) described and figured in: Veine-Tonizzo, L., Tissier, J., Bukhsianidze, M., Vasilyan, D., Becker, D., 2023, Cranial morphology and phylogenetic relationships of Amynodontidae Scott & Osborn, 1883 (Perissodactyla, Rhinocerotoidea). 

Metamynodon planifrons UNISTRA.2015.0.1106 View specimen

M3#716 Textured 3D surface model of the skull of the specimen UNISTRA.2015.0.1106 with right C1 and both rows of P2-M3. Type: "3D_surfaces" doi: 10.18563/m3.sf.716   state:published

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The present contribution contains the 3D virtual restoration of a Pliocene Lutrine right femur of Tobène, Senegal, described and figured in Lihoreau et al. (2021) : "A fossil terrestrial fauna from Tobène (Senegal) provides a unique early Pliocene window in Western Africa ". https://doi.org/10.1016/j.gr.2021.06.013 

Indet indet SN-Tob-12-02 View specimen

M3#441 Virtual restoration of SN-Tob-12-02 Type: "3D_surfaces" doi: 10.18563/m3.sf.441   state:published

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